Credits
Author
👩🏾💻 Shakira Agata
- Responsible for project design and agile SCRUM management
- Conceptualized, developed, documented and executed Jupyter notebooks and pipelines
- Performed data analysis and data harmonization
- Developed project visualizations for AOP network and integrated datasets
- Responsible for implementation of open science principles (e.g licensing, metadata and archiving)
- Created website and logo for The AOP Project
Supervisor
👨💻 Marvin Martens
- Supported in the SPARQL-Queries generation for AOP-Wiki AOP retrieval
- Conceptualized benchmarking metric
- Conceptualized the decision tree method
Acknowledgements
📧 Lars Eijssen & Jarno Koetsier
- Helped with questions regarding ArrayAnalysis and ArrayAnalysis Shiny
📧 Jay Tiesman & Hans-Juergen Schulten
- Helped with technical questions regarding dataset: E-GEOD-69851
🙋🏻♂️ Jiunn-Dat Chan
- Helped with questions regarding the interpretation of the decision tree method
📧 Ozan Cinar
- Helped with RStudio system set-up for ArrayAnalysis
🙋🏻♂️ Egon Willighagen
- Helped with a discussion on open-science principles and software licensing
📧 Martina-Summer Kutmon
- Provided Python extension command for CyTargetLinker
🙋🏼♂️ Danyel Jennen
- Helped with technical questions regarding ArrayQC